Book The Best Hotels in Beach Cities San Diego County, CA for 2026 from CA $96 - Fully Refundable Options

A city skyline at dusk with palm trees along a waterfront.

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Go beyond your typical stay in Beach Cities San Diego County

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Our top choices for Beach Cities San Diego County hotels

A living room with a large window, a flat-screen TV, and a patterned rug.

A multi-story hotel with a yellow facade, covered outdoor seating area, and a parking lot.

A hotel room with a glass table, two wooden chairs, a laptop, a pen, and a lamp.

A dining area with multiple tables and chairs, a television mounted on the wall, and a window with blinds.

1. GreenTree Inn San Diego Mission Bay

Pacific Beach

Joseph

CA $132

CA $151 total

includes taxes & fees

Sep 30 - Oct 1

A modern building with multiple windows, outdoor seating, and a chessboard.

A hotel with a pool, lounge chairs, and a sunset sky.

A modern hotel reception area with a marble counter, a 'Welcome to Hampton' sign, and a reception desk.

A spacious indoor area with a pool table, seating, and a staircase.

2. Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town

Point Loma

Xuan

CA $196

CA $225 total

includes taxes & fees

Oct 4 - Oct 5

A modern hotel lobby with a central seating area, a bar, and a large window providing natural light.

A hotel room with two beds, a desk, a chair, a sofa, and a small table.

A modern hotel lobby with a reception desk, bar area, and seating with bar stools and cushioned chairs.

A hotel with a sign reading "Wyndham Garden," surrounded by palm trees and a well-lit entrance.

3. Wyndham Garden San Diego Near SeaWorld

Point Loma

Nayla

CA $136

CA $156 total

includes taxes & fees

Oct 5 - Oct 6

A pool area with a hot tub, lounge chairs, and umbrellas.

A dining table set for a wedding with floral centerpieces and candles, overlooking a marina with boats.

An outdoor seating area with a fire pit table, surrounded by chairs and umbrellas, in a courtyard with palm trees and a building in the background.

A marina with boats, a bridge, and a building with a pool and palm trees.

4. The Dana on Mission Bay

Mission Bay

Satish

CA $239

CA $316 total

includes taxes & fees

Sep 27 - Sep 28

A seaside restaurant with outdoor seating overlooking the ocean, a pier in the background, and a clear sky.

The exterior of the Ocean Beach Hotel with a clear view of the entrance and large arched windows.

A hotel room with a large bed, a desk with a chair, a television, and a view of the beach.

A beach view with a pier extending into the ocean, a staircase leading down to the beach, and a railing with potted plants.

5. Ocean Beach Hotel

Ocean Beach

Robert

CA $194

CA $218 total

includes taxes & fees

Oct 20 - Oct 21

A hotel courtyard with outdoor seating, palm trees, and a view of the sea.

A resort with a swimming pool, lounge chairs, and a view of a lake and city skyline.

A Courtyard by Marriott hotel with a well-lit courtyard, outdoor seating, and a view of the surrounding area.

A bar area with multiple seating options, a well-stocked bar, and a television screen.

6. Courtyard by Marriott San Diego Airport/Liberty Station

Point Loma

Brittany

CA $263

CA $302 total

includes taxes & fees

Oct 25 - Oct 26

A balcony with a table set for two, overlooking a marina with numerous boats.

A modern hotel room with a balcony, a sofa, a chair, a coffee table, and two bedside tables with lamps.

A marina with multiple boats docked, a multi-story building with outdoor seating, and a clear view of the surrounding coastline.

A pool area with lounge chairs and umbrellas, overlooking a marina with numerous boats.

7. Bay Club Hotel & Marina

Point Loma

Jennifer

CA $225

CA $259 total

includes taxes & fees

Oct 26 - Oct 27

A pool area with lounge chairs and a hot tub, overlooking the ocean.

A hotel with a modern facade, large windows, and a palm tree in the foreground.

A hotel room with a bed, a desk, a small kitchenette, and a view of the ocean.

A living room with a grey sofa, red armchairs, a wooden coffee table, and a bookshelf filled with books.

8. The Wayfarer San Diego

Mission Beach

Scott

CA $318

CA $365 total

includes taxes & fees

Oct 26 - Oct 27

An aerial view of a resort with a central swimming pool, palm trees, and a view of the ocean and beach.

A modern building with a curved roof, surrounded by lush tropical vegetation.

An outdoor dining area with tables and chairs, umbrellas, and string lights against a sunset backdrop.

A waterfront hotel with a dock, palm trees, and a view of the water.

9. Paradise Point Resort & Spa

Mission Bay

Adarsh

CA $282

CA $399 total

includes taxes & fees

Oct 25 - Oct 26

A swimming pool with lounge chairs and umbrellas, surrounded by palm trees and a multi-story building with balconies.

A balcony with two chairs and a small table, overlooking a coastal area with buildings and a clear sky.

A modern lobby with a reception desk, seating area, and a large mirror.

10. Inn By The Sea La Jolla

Village of La Jolla

Dallin

CA $231

CA $266 total

includes taxes & fees

Sep 28 - Sep 29

A modern building with a sloped roof and large windows, surrounded by palm trees and a well-maintained garden.

A hotel entrance with a modern design, palm trees, and a sign indicating it is part of the Best Western Plus chain.

A restaurant with high ceilings, large windows, and a patterned carpet. Tables are set with chairs and place settings.

An outdoor patio with round tables and chairs, large umbrellas, and a marina view in the background.

11. Best Western Plus Island Palms Hotel & Marina

Point Loma

Michael

CA $197

CA $227 total

includes taxes & fees

Oct 26 - Oct 27

A modern dining area with wooden tables and chairs, a central bar area, and a view of the city through large windows.

A compact kitchenette with a microwave and coffee maker, a dark wood floor, and a mirror reflecting the room.

A modern living room with a brown leather sofa, striped armchairs, and a green ottoman.

A modern living room with a brown sofa, a black ottoman, a purple armchair, and a round coffee table. There is a television mounted on the wall and a wooden shelf with a decorative item.

12. La Quinta Inn & Suites by Wyndham San Diego Mission Bay

Pacific Beach

Lauren

CA $165

CA $190 total

includes taxes & fees

Oct 1 - Oct 2

A modern restaurant with high tables, booths, and a central island.

A modern reception area with a wooden ceiling, a large globe artwork, and a snack display.

A gym with treadmills, exercise bikes, and a pool area visible through glass doors.

A modern living room with a stone fireplace, two sofas, ottomans, and a patterned rug.

13. Fairfield Inn & Suites by Marriott San Diego Pacific Beach

Pacific Beach

Sergio

CA $171

CA $196 total

includes taxes & fees

Oct 25 - Oct 26

A resort pool area with a small waterfall, surrounded by palm trees and lush greenery.

A serene garden with a pond, palm trees, and a building in the background.

An outdoor dining area with round tables set for a meal, surrounded by trees and greenery.

A spacious indoor area with large windows, a staircase, and seating arrangements.

14. Sheraton La Jolla Hotel

La Jolla Village

Jadyn Brooks

CA $281

CA $323 total

includes taxes & fees

Sep 27 - Sep 28

A gym with treadmills, an elliptical, and dumbbells, with a TV on the wall and large windows.

A room with a wooden cabinet stocked with snacks and a beverage refrigerator.

A modern dining area with tables and chairs, a kitchen area with cabinets and appliances, and a large window.

15. Comfort Inn Sea World Area

Point Loma

Karla Daniela

CA $155

CA $178 total

includes taxes & fees

Sep 29 - Sep 30

A balcony with a metal table and chair, a wooden panel wall, and a view of a parking area with a sign reading "Sands of Jolla".

An elevator with a metallic interior and marble walls.

A modern bedroom with a bed, bedside table, and a desk area.

A modern bathroom with a white vanity, a built-in shower, and a small plant on the countertop.

16. The Sands of La Jolla

Bird Rock

Roman

CA $182

CA $205 total

includes taxes & fees

Oct 6 - Oct 7

A hotel balcony with a curved railing, outdoor seating, and palm trees.

A beachfront hotel with a balcony overlooking the ocean, a walkway lined with palm trees, and a view of the beach.

A multi-story hotel with a curved entrance, palm trees, and a balcony with a railing.

A pool area with umbrellas, palm trees, and a view of the ocean.

17. Pacific Terrace Hotel

Pacific Beach

Nancy

CA $378

CA $434 total

includes taxes & fees

Oct 14 - Oct 15

A marina with numerous boats docked, a clear sky with the sun setting, and a cityscape in the background.

A modern hotel lobby with a wooden floor, two white armchairs, a reception desk, an ATM, and a staircase.

A hotel room with a large bed, two bedside tables with lamps, a wardrobe, and a bench.

A hotel room with a large bed, a red armchair, a balcony with a view of boats and buildings, and a lamp on the nightstand.

18. Ramada by Wyndham San Diego Airport

Point Loma

Aaron

CA $140

CA $161 total

includes taxes & fees

Sep 29 - Sep 30

A poolside view with a lounge chair, a towel, a tray with a drink and a coconut, and a pool with palm trees in the background.

A modern dining area with a glass table, candles, and wicker chairs.

A coastal hotel with multiple buildings, a marina with boats, and a beach area.

An outdoor seating area with a canopy, lounge chairs, and a fire pit.

19. San Diego Mission Bay Resort

Mission Bay

Evangeline

CA $341

CA $466 total

includes taxes & fees

Oct 4 - Oct 5

An outdoor dining area with tables and chairs, overlooking a beach and ocean.

A beachside hotel with a row of beach chairs and umbrellas, palm trees, and a calm sea.

A large, multi-deck riverboat with a white exterior and multiple levels of balconies.

A serene garden with a pond, lush greenery, and a gazebo.

20. Bahia Resort Hotel

Central Mission Beach

melissa

CA $223

CA $335 total

includes taxes & fees

Oct 25 - Oct 26

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Vacation Rentals in Beach Cities San Diego County

Condo

A coastal hotel with multiple floors, a beach view, and a pier in the background.

A living room with a TV, sofa, coffee table, and a view of the ocean through large windows.

A bedroom with a large bed, a dresser, and a view of the ocean through floor-to-ceiling windows.

A room with two leather recliners and a small table, large windows with curtains, and a view of the sea.

Capri by the Sea by All Seasons Resort Lodging

Pacific Beach

"Best beach vacation."

Condo

A multi-story hotel with a modern design, located near a beach with palm trees.

A room with a large window overlooking a beach, two leather chairs with cushions, a brown sofa, and a lamp.

A beach with palm trees, a pier, and a clear blue sky.

A modern kitchen with granite countertops, stainless steel appliances, and a view of the ocean.

Capri Beach Accommodations

Pacific Beach

"Amazing place to stay!"

Cottage

A modern house with a covered patio, a brick wall, and a variety of plants.

A bedroom with a bed, a bedside table, a chair, a window with blinds, a painting, and a wall-mounted mirror.

A modern kitchen with a marble countertop, stainless steel appliances, and pendant lighting.

A modern living room with a flat-screen TV, a fireplace, a dining area with a table and chairs, and a leather sofa.

San Diego Home w/ Deck: Walk to Mission Beach!

Mission Beach

Condo

A spacious living room with a fireplace, a ceiling fan, and a glass dining area overlooking the ocean.

A spacious living room with a fireplace, comfortable seating, a large TV, and a view of the outdoors.

A modern hotel with a central atrium, multiple balconies, and a clear sky.

A bedroom with a large window, a bed with a checkered bedspread, and a view of a balcony with outdoor seating.

Surf Rider D

Mission Beach

Cottage

A living room with a white sofa, two blue armchairs, a wooden coffee table, and a painting on the wall.

A living room with a fireplace, two sofas, a coffee table, and a large painting on the wall.

A spacious living room with a white sofa, blue armchairs, a wooden coffee table, and a staircase leading to an upper floor.

A kitchen with wooden cabinets, a stainless steel refrigerator, and a marble countertop. There are three hanging pendant lights, a potted plant, and a table with four chairs.

< 2 Mi to Pacific Beach! Sunny San Diego Escape

Pacific Beach

"Strategic location for beach, amusement parks and restaurants. Close to major freeways and airport. House has plenty of room across the three floors. Kids loved seeing the seaworld fireworks from the open air rooftop patio. This property has it all. Owner quickly addressed any of our questions and needs. "

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Stay near popular Beach Cities San Diego County attractions

A beach with sailboats, people relaxing, and a 'Boat Rentals' sign.

Mission Bay

9.2/10 (12,725 reviews)

Mingle with eccentric locals at bohemian beaches, soak up the sun on a Jet Ski and fish from marshy islands at San Diego’s premier water park.

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A coastal cityscape at dusk with a prominent amusement park, including a roller coaster and Ferris wheel, and a modern building complex.

Mission Beach

9.0/10 (17,685 reviews)

A favorite vacation spot for 100 years, this seaside village combines old-fashioned charm with modern amenities.

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A coastal cityscape with a golf course, beachfront, and residential buildings.

La Jolla Cove

9.4/10 (8,246 reviews)

Enjoy world-class shopping, restaurants and beaches in the sparkling “Jewel City” along the ocean.

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A coastal scene with a pier extending into the ocean, a sandy beach, and a cliff with buildings on top.

La Jolla Beach

9.6/10 (1,296 reviews)

Why not spend a lazy afternoon at La Jolla Beach during your trip to La Jolla? Discover the area's beautiful sunsets and top-notch restaurants.

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A coastal walkway with a large tree in the foreground, a body of water, a ship, and a cityscape in the background.

Shelter Island

8.8/10 (37 reviews)

Commune with nature and explore the great outdoors at Shelter Island during your travels in San Diego. Stroll along the marina in this family-friendly area, or check out its top-notch restaurants.

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A coastal town with a beach, marina, and residential buildings.

Mission Beach Boardwalk

9.4/10 (78 reviews)

After visiting Mission Beach Boardwalk, make a plan to see the other sights and activities in San Diego. Discover the beautiful sunsets and top-notch restaurants in this walkable area.

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A coastal landscape with a prominent cliff and ocean waves.

Torrey Pines Golf Course

9.0/10 (601 reviews)

Play a round of golf in La Jolla at Torrey Pines Golf Course, and enjoy other activities such as surfing. Wander the beautiful beaches and seaside in this family-friendly area.

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Pechanga Arena

8.6/10 (124 reviews)

Catch an event at Pechanga Arena during your trip to San Diego. Discover the beautiful sunsets and top-notch restaurants in this walkable area.

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Learn more about Beach Cities San Diego County

Discover the seaside area of Beach Cities San Diego County—amazing beaches, a must-see zoo, and top sights from Mission Bay to Mission Beach.

See all hotels in Beach Cities San Diego County

A rocky coastline with palm trees and people at sunset.

Top Beach Cities San Diego County Hotel Reviews

Bay Club Hotel & Marina

10/10 Excellent

"Nice Staff and great view"

Bahia Resort Hotel

10/10 Excellent

"All I can say, I’ve stayed there 3 times in the past 2 months. Beautiful and loved it. Love all the amenities."

La Jolla Shores Hotel

10/10 Excellent

"Excellent, we’ll be back!"

Heritage Inn San Diego

8/10 Good

"The desk staff were friendly and helpful, as was the maintenance chap. The first night there I was still on England time so was wandering around with my coffee at 3 am to check where the pool was and enjoy the quiet, the night security guy was awesome too! The bed was clean and cozy and it was pretty swishy to have USB charger ports as part of the lamps. Never seen that before. The location is ideal for getting around on buses to explore a bunch of different areas of the city. Definitely grateful for a fridge in the room so I could get milk and have cereal in the mornings [VONS, Grocery Outlet and Target are all a short walk away] instead of shelling out 20-30 bucks a day for Denny's or IHOP! That would take half of my daily spending money right away, not to mention the detriment to health. The only not-so-great thing is the dusting... the top of electric outlets and drawer handles seemed to be overlooked [I'm a cleaner myself so tend to notice these things, maybe others wouldn't!], and a couple of times I'd put the "maid service please" sign on the door, I came back to find it hadn't been done at all. Still not at all worth making any formal complaint about because it had zero affect on what a monumental and glorious time I had in San Diego- just be aware that if these sorts of trivial matters would be important to you more than they were to me, then this probably isn't your place. I'd definitely stay here again, no question. Thanks to you all!"

Estancia La Jolla Hotel & Spa

10/10 Excellent

"The room is clean,services are pretty good. Environment is perfect."

More cheap stays in Beach Cities San Diego County

Heritage Inn San Diego

3333 Channel Way San Diego CA

CA $83

CA $96 total

Oct 11 - Oct 12

includes taxes & fees

7/10 Good! (2,007 reviews)

GreenTree Inn San Diego Mission Bay

4540 Mission Bay Drive San Diego CA

CA $132

CA $151 total

Sep 30 - Oct 1

includes taxes & fees

PB Surf Beachside Inn

4760 Mission Blvd San Diego CA

CA $152

CA $171 total

Sep 29 - Sep 30

includes taxes & fees

Best Western Yacht Harbor Hotel

5005 N Harbor Dr San Diego CA

CA $161

CA $185 total

Oct 25 - Oct 26

includes taxes & fees

8.4/10 Very good! (2,057 reviews)

Ocean Villa Inn

5142 West Point Loma Blvd San Diego CA

CA $164

CA $185 total

Sep 27 - Sep 28

includes taxes & fees

8/10 Very good! (1,393 reviews)

The Beach Cottages

4255 Ocean Boulevard San Diego CA

CA $215

CA $247 total

Oct 19 - Oct 20

includes taxes & fees

9.2/10 Wonderful! (1,004 reviews)

Hotels in Beach Cities San Diego County with star rating

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Book Hotels in Beach Cities San Diego County on Expedia.com

Find hotels in Beach Cities San Diego County, CA from CA $96

Change your mind

Treat yourself

Be picky

Go beyond your typical stay in Beach Cities San Diego County

Check prices for these dates

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Star rating

Guest rating

Our top choices for Beach Cities San Diego County hotels

1. GreenTree Inn San Diego Mission Bay

2. Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town

3. Wyndham Garden San Diego Near SeaWorld

4. The Dana on Mission Bay

5. Ocean Beach Hotel

6. Courtyard by Marriott San Diego Airport/Liberty Station

7. Bay Club Hotel & Marina

8. The Wayfarer San Diego

9. Paradise Point Resort & Spa

10. Inn By The Sea La Jolla

11. Best Western Plus Island Palms Hotel & Marina

12. La Quinta Inn & Suites by Wyndham San Diego Mission Bay

13. Fairfield Inn & Suites by Marriott San Diego Pacific Beach

14. Sheraton La Jolla Hotel

15. Comfort Inn Sea World Area

16. The Sands of La Jolla

17. Pacific Terrace Hotel

18. Ramada by Wyndham San Diego Airport

19. San Diego Mission Bay Resort

20. Bahia Resort Hotel

Vacation Rentals in Beach Cities San Diego County

Capri by the Sea by All Seasons Resort Lodging

Capri Beach Accommodations

San Diego Home w/ Deck: Walk to Mission Beach!

Surf Rider D

< 2 Mi to Pacific Beach! Sunny San Diego Escape

Stay near popular Beach Cities San Diego County attractions

Mission Bay

Mission Beach

La Jolla Cove

La Jolla Beach

Shelter Island

Mission Beach Boardwalk

Torrey Pines Golf Course

Pechanga Arena

Learn more about Beach Cities San Diego County

Top Beach Cities San Diego County Hotel Reviews

Bay Club Hotel & Marina

Bahia Resort Hotel

La Jolla Shores Hotel

Heritage Inn San Diego

Estancia La Jolla Hotel & Spa

More cheap stays in Beach Cities San Diego County

Heritage Inn San Diego

GreenTree Inn San Diego Mission Bay

PB Surf Beachside Inn

Best Western Yacht Harbor Hotel

Ocean Villa Inn

The Beach Cottages

Hotels in Beach Cities San Diego County with star rating

Explore a world of travel with Expedia

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